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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs960536 chr2:124913598 G/T GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs9656897 chr8:112994222 A/G KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs9751219 chr2:195121448 T/C PRHOXNB chr13:28552243-28562774:- -0.75 -9.78 2.23E-13 Box Plot
ACC rs9808045 chr2:88723965 C/A PRHOXNB chr13:28552243-28562774:- 0.6 8.1 8.85E-11 Box Plot
ACC rs981455 chr2:124920751 T/C GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs985300 chr1:224716765 T/C PRHOXNB chr13:28552243-28562774:- -0.6 -7.91 1.79E-10 Box Plot
ACC rs9862328 chr3:93580974 T/G PRHOXNB chr13:28552243-28562774:- 0.64 8.78 7.73E-12 Box Plot
ACC rs9922371 chr16:8040892 C/T ABR chr17:906758-1132315:- -1.08 -7.72 3.6E-10 Box Plot
ACC rs9949622 chr18:70101854 A/T GAGE2D chrX:49207160-49214420:+ 0.62 7.51 7.59E-10 Box Plot
BLCA rs10002767 chr4:99298166 A/G KIF6 chr6:39297766-39693181:- 0.56 5.97 5.37E-9 Box Plot
BLCA rs10002844 chr4:188110285 C/G C4orf41 chr4:184580446-184634744:+ 0.74 6.69 8.16E-11 Box Plot
BLCA rs10005460 chr4:12580386 T/C KRTAP13-1 chr21:31768392-31769140:+ 0.15 6.43 3.77E-10 Box Plot
BLCA rs10009307 chr4:152044300 C/T CT47A9 chrX:120077415-120080737:- 0.21 6.33 6.78E-10 Box Plot
BLCA rs1001196 chr1:214044126 C/T RCOR3 chr1:211431719-211489727:+ 0.61 6.48 2.84E-10 Box Plot
BLCA rs10023638 chr4:12576387 C/T KRTAP13-1 chr21:31768392-31769140:+ 0.15 6.21 1.4E-9 Box Plot