Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
---|---|---|---|---|---|---|---|---|---|
ACC | rs960536 | chr2:124913598 | G/T | GC | chr4:72607410-72669758:- | 0.68 | 9.87 | 1.65E-13 | Box Plot |
ACC | rs9656897 | chr8:112994222 | A/G | KRT6C | chr12:52862300-52867569:- | 0.85 | 9.67 | 3.27E-13 | Box Plot |
ACC | rs9751219 | chr2:195121448 | T/C | PRHOXNB | chr13:28552243-28562774:- | -0.75 | -9.78 | 2.23E-13 | Box Plot |
ACC | rs9808045 | chr2:88723965 | C/A | PRHOXNB | chr13:28552243-28562774:- | 0.6 | 8.1 | 8.85E-11 | Box Plot |
ACC | rs981455 | chr2:124920751 | T/C | GC | chr4:72607410-72669758:- | 0.68 | 9.87 | 1.65E-13 | Box Plot |
ACC | rs985300 | chr1:224716765 | T/C | PRHOXNB | chr13:28552243-28562774:- | -0.6 | -7.91 | 1.79E-10 | Box Plot |
ACC | rs9862328 | chr3:93580974 | T/G | PRHOXNB | chr13:28552243-28562774:- | 0.64 | 8.78 | 7.73E-12 | Box Plot |
ACC | rs9922371 | chr16:8040892 | C/T | ABR | chr17:906758-1132315:- | -1.08 | -7.72 | 3.6E-10 | Box Plot |
ACC | rs9949622 | chr18:70101854 | A/T | GAGE2D | chrX:49207160-49214420:+ | 0.62 | 7.51 | 7.59E-10 | Box Plot |
BLCA | rs10002767 | chr4:99298166 | A/G | KIF6 | chr6:39297766-39693181:- | 0.56 | 5.97 | 5.37E-9 | Box Plot |
BLCA | rs10002844 | chr4:188110285 | C/G | C4orf41 | chr4:184580446-184634744:+ | 0.74 | 6.69 | 8.16E-11 | Box Plot |
BLCA | rs10005460 | chr4:12580386 | T/C | KRTAP13-1 | chr21:31768392-31769140:+ | 0.15 | 6.43 | 3.77E-10 | Box Plot |
BLCA | rs10009307 | chr4:152044300 | C/T | CT47A9 | chrX:120077415-120080737:- | 0.21 | 6.33 | 6.78E-10 | Box Plot |
BLCA | rs1001196 | chr1:214044126 | C/T | RCOR3 | chr1:211431719-211489727:+ | 0.61 | 6.48 | 2.84E-10 | Box Plot |
BLCA | rs10023638 | chr4:12576387 | C/T | KRTAP13-1 | chr21:31768392-31769140:+ | 0.15 | 6.21 | 1.4E-9 | Box Plot |